Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857518.1_cds_XP_016513455.1_25996
CDS Infomation

[gene=LOC107830423] [db_xref=GeneID:107830423] [protein=conserved oligomeric Golgi complex subunit 7-like] [protein_id=XP_016513455.1] [location=join(122618..122902,123426..123515,123666..123785,123867..123968,124082..124385,129675..129791,130218..130416,131147..131825,131984..132316,132679..132957)] [gbkey=CDS]
Sequence

ATGTTTGGGGATCTGAGTTCCTTCTCCGACGAGAAATTCGACCCGAAAAAATGGATAAAC
GGCGCGTGTCAGTCACGGAACCCACAGGATCCAGTGGTCAAACACCTAATGGATTTGGAA
ATGAAGCTTCAGATGGTTTCCGAAGAGATCGCCGCTTCCCTTGAGGAGCAAAGCGCCGCC
GCACTCCTCCGTGTTCCCCGCACCACTCGCGATGTCAGCCGCCTCCGTGATGATGCTCTC
ACCCTTCGCTCCGCTCTCTCCGCCATCCTCCTCAAGCTTAAAAAGGCTGAGGGATCATCT
GCTGAATCTGTAGCTACACTTGCCAAAGTTGATGCTGTCAAGCGCAGAATGGAAGCTGCA
TATGAGACTTTGCAGGATGCTGCTGGTTTAACTCAACTAAGCTCAACAGTGGAGGATGTA
TTTGCCAGTGGTGATCTTCCACGAGCTGCAGAAACTCTGGCTAATATGAGGCACTGCTTG
GCTGCCGTTGGAGAGGTTGCGGAATTTGCTAATATTAGGAGGCAGCTTGAAGTTTTAGAA
GATAGACTAGACTCAATGGTCCAACCTCGACTAACAGATGCTCTAAGCAATCGAAAGGTT
GATGTTGCCCAAGAAATGCGTGCTATTCTACTGAGAATTGGGAGATTCAAGTCCTTAGAG
ATCCACTACACCAACTTCCACATCAAGCCAATAAAGCGGCATTGGGAAGATTTTAACTTG
AGGCAGCAGGCTAATAAAGTTGCAAATGAGAAAAGTGAAACAGAAAGGTTATCAAATGCT
CAGGATTTTCATTCATCCACGATATCATTCTCAAGTTGGCTGCCTAGTTTCTACGATGAA
TTGTTGCTTTATCTTGAACAGGAGTGGAAGTGGTACGGATTGCTTTTCATCAACTTTTAT
TCCNATCTTGTACCAAACCTACTAATTGAAACAATGTCAGCTATTGGTATGAGCTTTGCA
TCACAGATTAACCTTGCCACTGGGGATGCCGTGCCTGAGACAAAAGCCTTGGCTAAAGGT
ATAATCGATATCTCAAATGGAGATTTGCCAAAAGGTGCCAAGATTCAGTCTAAACATTTG
GAGGCCCTAATTGAACTTCATAATACAACAGGGAGCTTTGCTAGGAACATTCAACACCTG
TTTTCAGACGCTGATCCACAAGTTCTGTCAGATGCTCTGAAGGCAGTCTACCTTCCTTAT
GAATCTTTCAAAAGGCGATATGGACAAATGGAGCGTGCAGTTCTCTCTGGTGAGATTGCA
GGACTTGATCTCAGAGGAGCTGCTGTTACTCTAGTGGGAGTCCAGGGAGTTGAGCTTAGT
GAAACTGTACGAAGGATGGAAGAGTCAATTCCACACGTTATTTTGCTTCTTGAAGCAGCA
GTTGAAAGATGCATCAACTTTACTGGTGGTTCCGAGGTGGAGGAGCTAATTCTTGCGCTG
GATGATGTTATGCTACAATACATTTCCACTTTGCAGGAGAACCTAAAATCATTGAGAGCT
GTTTGTGGACTGGATATGGATGCTACTAGTACAAAGAAAGACACAGGAGCAGAAAGAAGG
GAAGCAGCTCCAAATGCACGTAAAGTTGATTTCACATCAAGTGAGGAAGAGTGGTCATTT
GTTCAAGGTGCACTGCAGATCCTCACGGTTGCTGATTGTTTAACCAGTAGATCTTCAGTC
TTTGAAGCTTCCCTCAAGGCTACTCTTGCTAGGTTGAATACAAGTCTCGCTCTCTCAGTT
TTTGGGCCAAGTATTGGTAAGAACCAACCAGATGTAGTCAATGATGATGGAAGTGGGCAA
TTATCTGTGGCTCGAAGGGTGGCCTTGGATGTGGCAGCTGTGAAGCTACTGGATATTCCT
GAGAAGGGTCGGAAGCTTCTTAATTTGTTGGAGCAGTCTAAAGATCCCAGATTCCATGCA
CTTCCAGTAGCATCACAACGAGTTACGGCTTTCACAGACGCAGTCAGTGAGCTTGTTTAT
GATGTTCTCATATCAAAAGTACGGCAGCAGTTCATTGGTCTGTCACGCCTGCCCATATGG
TCATCTGTTGAAGAACATAGTGCTAGGCCCCTTCCAACCTTCAGCGCATACCCCCAGTCT
TATGTGACTGGTGTTGGTGAATATCTCCTTACTTTACCCCAACAGCTAGAGCCACTTGTA
GAGAATATTTCCAACAGTGATCCCAATGCTGATGAGGCCCAGTACTTTGCAACTGAATGG
ATGTTTAAGGTTGCTGAAGGTGCCACTGCACTTTACATGGAACAGCTTCGAGGGATCCAG
TACATAACAGATCGTGGAGCACAGCAGCTTTCTGTTGATATAGAGTATCTAAGCAATGTA
CTCTCAGCTCTATCAATGCCAATTCCTACAGTTCTTGCCACATTCCAGACATGTTTTTCA
ACACCTAGAAATCAGCTCAAGGATCTTATAAAAACAGATTCAGGGAATCAGCTTGATCTT
CCTACTGCTAATCTTGTCTGCAAGATGCGACGTATCAGTTTAGAATAA

Peptide Sequence

PEP ID

XP_016513455.1
PEP Infomation

PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Nicotiana tabacum]
Sequence

MFGDLSSFSDEKFDPKKWINGACQSRNPQDPVVKHLMDLEMKLQMVSEEIAASLEEQSAA
ALLRVPRTTRDVSRLRDDALTLRSALSAILLKLKKAEGSSAESVATLAKVDAVKRRMEAA
YETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLAAVGEVAEFANIRRQLEVLE
DRLDSMVQPRLTDALSNRKVDVAQEMRAILLRIGRFKSLEIHYTNFHIKPIKRHWEDFNL
RQQANKVANEKSETERLSNAQDFHSSTISFSSWLPSFYDELLLYLEQEWKWYGLLFINFY
SXLVPNLLIETMSAIGMSFASQINLATGDAVPETKALAKGIIDISNGDLPKGAKIQSKHL
EALIELHNTTGSFARNIQHLFSDADPQVLSDALKAVYLPYESFKRRYGQMERAVLSGEIA
GLDLRGAAVTLVGVQGVELSETVRRMEESIPHVILLLEAAVERCINFTGGSEVEELILAL
DDVMLQYISTLQENLKSLRAVCGLDMDATSTKKDTGAERREAAPNARKVDFTSSEEEWSF
VQGALQILTVADCLTSRSSVFEASLKATLARLNTSLALSVFGPSIGKNQPDVVNDDGSGQ
LSVARRVALDVAAVKLLDIPEKGRKLLNLLEQSKDPRFHALPVASQRVTAFTDAVSELVY
DVLISKVRQQFIGLSRLPIWSSVEEHSARPLPTFSAYPQSYVTGVGEYLLTLPQQLEPLV
ENISNSDPNADEAQYFATEWMFKVAEGATALYMEQLRGIQYITDRGAQQLSVDIEYLSNV
LSALSMPIPTVLATFQTCFSTPRNQLKDLIKTDSGNQLDLPTANLVCKMRRISLE

Transcript Sequence

Gene sequence data has not been registered.